Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| BLCA | rs34713430 | chr5:3494045 | ATT/A | 1.04E-5 | 403 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs34992375 | chr5:131595642 | CTTAT/C | 2.87E-6 | 403 | 18.62 | 19.97 | 13.93 | KM Plot |
| BLCA | rs35093298 | chr5:3460454 | T/C | 9.49E-6 | 405 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs35099902 | chr5:3473373 | T/C | 1.04E-5 | 403 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs35155570 | chr5:3518273 | C/T | 9.28E-6 | 403 | 17.4 | 19.92 | 4.37 | KM Plot |
| BLCA | rs35183718 | chr5:3498590 | A/C | 9.61E-6 | 404 | 17.4 | 19.92 | 4.37 | KM Plot |
| BLCA | rs35209468 | chr5:3473582 | C/T | 1.04E-5 | 403 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs35249343 | chr5:3463116 | G/C | 9.49E-6 | 405 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs35450818 | chr5:3491486 | T/C | 1.04E-5 | 403 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs35451111 | chr5:3466737 | A/G | 1.04E-5 | 403 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs35559998 | chr5:3479991 | G/T | 1.04E-5 | 403 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs35573920 | chr5:3486281 | C/T | 1.04E-5 | 403 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs35619155 | chr5:3495233 | T/C | 1.04E-5 | 403 | 17.4 | 19.4 | 4.37 | KM Plot |
| BLCA | rs35747152 | chr5:3459151 | T/C | 9.23E-6 | 403 | 17.4 | 19.58 | 4.37 | KM Plot |
| BLCA | rs35772730 | chr5:3534769 | G/C | 1.14E-5 | 402 | 17.03 | 20.07 | 4.37 | KM Plot |